The detailed information of tRNA gene sequence


Sequence ID>SRA1004305
Genome IDSRR002328.260211
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 179
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcacgctagt
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGGGGGTTCAAG
TCCCTCACGGCCTACCA
Downstream region at tRNA end position 
ctgaaatcaa
Secondary structure (Cloverleaf model)
>SRA1004305	Met	CAT
                   t      ACCA ctgaaatcaa
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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