The detailed information of tRNA gene sequence


Sequence ID>SRA1004313
Genome IDSRR002328.267803
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 77
End posion on genome 152
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
accggatgac
tRNA gene sequence
GGGGCCGTAGCTCAGCTGGGAGAGCGCTGCAATGGCATTGCAGAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position
tccggacttg
Secondary structure (Cloverleaf model)
>SRA1004313	Ala	GGC
                   c      ACCA tccggacttg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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