The detailed information of tRNA gene sequence


Sequence ID>SRA1004320
Genome IDSRR002328.275524
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cctctcatga
tRNA gene sequence 
GGCCAGGTAGCTCAGTCGGTAGAGCAATGGATTGAAAATCCATGTGTCGGCGGTTCGATT
CCGTCCCTGGCCACCA
Downstream region at tRNA end position 
tcttttcttc
Secondary structure (Cloverleaf model)
>SRA1004320	Phe	GAA
                   a      ACCA tcttttcttc
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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