The detailed information of tRNA gene sequence


Sequence ID>SRA1004345
Genome IDSRR006906.3553
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 182
End posion on genome 104
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaagat
tRNA gene sequence 
GGCTACGTAGCTCAGTTTGGTTAGAAGCACATCACTCATAATGATGGGGTCACAGGTTCG
AATCCCGTCGTAGCCACCA
Downstream region at tRNA end position 
tctttttttg
Secondary structure (Cloverleaf model)
>SRA1004345	Met	CAT
                   t      ACCA tctttttttg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T T G A        A      | |   | |     G
  T         C T C G       A C A G G     C
  G           | | |                 T T
  G         A A G C
    T T A G        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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