The detailed information of tRNA gene sequence


Sequence ID>SRA1004366
Genome IDSRR006906.12110
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 232
End posion on genome 157
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aacacaattt
tRNA gene sequence 
GGGTTGTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGT
CCAGTACAACCCACCA
Downstream region at tRNA end position 
ctttattttc
Secondary structure (Cloverleaf model)
>SRA1004366	Val	TAC
                   t      ACCA ctttattttc
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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