The detailed information of tRNA gene sequence


Sequence ID>SRA1004414
Genome IDSRR006906.25686
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 146
End posion on genome 71
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttacgtagt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
aatttactcc
Secondary structure (Cloverleaf model)
>SRA1004414	Ala	GGC
                   t      ACCA aatttactcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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