The detailed information of tRNA gene sequence


Sequence ID>SRA1004441
Genome IDSRR006906.30905
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 133
End posion on genome 57
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcaagcgct
tRNA gene sequence 
GGTTTGGTAGTTCAGTTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGAG
TCCCGTCCAGACCGCCA
Downstream region at tRNA end position 
gtaaagagga
Secondary structure (Cloverleaf model)
>SRA1004441	Asp	GTC
                   t      GCCA gtaaagagga
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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