The detailed information of tRNA gene sequence


Sequence ID>SRA1004470
Genome IDSRR006906.41424
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 16
End posion on genome 103
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtaaaaattt
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
aattgtaaaa
Secondary structure (Cloverleaf model)
>SRA1004470	Ser	GGA
                   t      GCCA aattgtaaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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