The detailed information of tRNA gene sequence


Sequence ID>SRA1004473
Genome IDSRR006906.42271
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 138
End posion on genome 213
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
catcctcaac
tRNA gene sequence 
GTCCCTATCGTCTAGAGGCCTAGGACATCGCCCTTTCACGGCGGTAACCGGGGTTCGAAT
CCCCGTAGGGACGCCA
Downstream region at tRNA end position 
tcttcttttc
Secondary structure (Cloverleaf model)
>SRA1004473	Glu	TTC
                   c      GCCA tcttcttttc
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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