The detailed information of tRNA gene sequence


Sequence ID>SRA1004481
Genome IDSRR006906.45859
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 193
End posion on genome 106
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
gcgacaattt
tRNA gene sequence
GGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GGGGGTTCGAATCCCCCCCTCACCGCCA
Downstream region at tRNA end position
tatttaagtt
Secondary structure (Cloverleaf model)
>SRA1004481	Ser	GGA
                   t      GCCA tatttaagtt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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