The detailed information of tRNA gene sequence


Sequence ID>SRA1004490
Genome IDSRR006906.48819
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 142
End posion on genome 54
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaacaattt
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GGGGGTTCGAATCCCCCCCTCCACCGCC
Downstream region at tRNA end position 
Atatttaaag
Secondary structure (Cloverleaf model)
>SRA1004490	Ser	GGA
                   t      CGCC Atatttaaag
                     G - C
                     G   A
                     T   C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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