The detailed information of tRNA gene sequence


Sequence ID>SRA1004495
Genome IDSRR006906.51123
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 135
End posion on genome 211
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgccccgcat
tRNA gene sequence 
CGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAA
TCCTCTCTCGCCGACCA
Downstream region at tRNA end position 
ccattcgaaa
Secondary structure (Cloverleaf model)
>SRA1004495	Pro	TGG
                   t      ACCA ccattcgaaa
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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