The detailed information of tRNA gene sequence


Sequence ID>SRA1004500
Genome IDSRR006906.52301
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 105
End posion on genome 181
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatattgtaa
tRNA gene sequence 
GGACCTATAACTCAGATGGTTAGAGTAGCGCTCTCATAAAGCGAAAGTCGTAAGTTCGAA
TCTTACTAGGTCCACAA
Downstream region at tRNA end position 
aagattgagc
Secondary structure (Cloverleaf model)
>SRA1004500	Met	CAT
                   a      ACAA aagattgagc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     C A T T C     A
      A G A        A      | | | | |     G
    T       C T C A       G T A A G     C
    G       | | | |                 T T
    G       G A G T
      T T A        A     AAGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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