The detailed information of tRNA gene sequence


Sequence ID>SRA1004508
Genome IDSRR006906.54394
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 182
End posion on genome 107
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
ccggctcgat
tRNA gene sequence
GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACT
CCTATTATCGGCACCA
Downstream region at tRNA end position
ctccctcttc
Secondary structure (Cloverleaf model)
>SRA1004508	Thr	CGT
                   t      ACCA ctccctcttc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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