The detailed information of tRNA gene sequence


Sequence ID>SRA1004528
Genome IDSRR006906.59249
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 150
End posion on genome 74
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
aaccgaatgc
tRNA gene sequence
GGAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position
ctacttaaga
Secondary structure (Cloverleaf model)
>SRA1004528	Asp	GTC
                   c      GCCA ctacttaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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