The detailed information of tRNA gene sequence


Sequence ID>SRA1004529
Genome IDSRR006906.59271
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 167
End posion on genome 92
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
gattaagtgt
tRNA gene sequence
GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATT
CCGGTAGTCGGCACCA
Downstream region at tRNA end position
tttatctaaa
Secondary structure (Cloverleaf model)
>SRA1004529	Thr	TGT
                   t      ACCA tttatctaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T T
                    T     T G G C C     A
      T G A        A      | | |   |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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