The detailed information of tRNA gene sequence


Sequence ID>SRA1004544
Genome IDSRR006906.63863
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 40
End posion on genome 115
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
caaaccctgt
tRNA gene sequence
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATC
CCGCTTACCTCCACCA
Downstream region at tRNA end position
aaaatttagc
Secondary structure (Cloverleaf model)
>SRA1004544	Ala	GGC
                   t      ACCA aaaatttagc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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