The detailed information of tRNA gene sequence


Sequence ID>SRA1004569
Genome IDSRR006906.71846
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 235
End posion on genome 160
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
ctaaagcagt
tRNA gene sequence
GCCGACTTAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCCGTTCGACT
CGGATAGTCGGCACCA
Downstream region at tRNA end position
tctttttacc
Secondary structure (Cloverleaf model)
>SRA1004569	Thr	TGT
                   t      ACCA tctttttacc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T C
                    T     T A G G C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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