The detailed information of tRNA gene sequence


Sequence ID>SRA1004574
Genome IDSRR006906.73094
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 235
End posion on genome 159
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgactgtatG
tRNA gene sequence 
GGGCGTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
tatagtccgg
Secondary structure (Cloverleaf model)
>SRA1004574	Ala	TGC
                   G      ACCA tatagtccgg
                     G - C
                     G - C
                     G + T
                     C   C
                     G   G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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