The detailed information of tRNA gene sequence


Sequence ID>SRA1004590
Genome IDSRR006906.77889
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 169
End posion on genome 93
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagaatcggt
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
CCCCGTCCGTTCCGCCA
Downstream region at tRNA end position 
cttaattgat
Secondary structure (Cloverleaf model)
>SRA1004590	Asp	GTC
                   t      GCCA cttaattgat
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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