The detailed information of tRNA gene sequence


Sequence ID>SRA1004599
Genome IDSRR006906.81564
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 192
End posion on genome 268
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
agactcaagt
tRNA gene sequence
GCAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCTGCGCCA
Downstream region at tRNA end position
cttaannnnn
Secondary structure (Cloverleaf model)
>SRA1004599	Asp	GTC
                   t      GCCA cttaannnnn
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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