The detailed information of tRNA gene sequence


Sequence ID>SRA1004619
Genome IDSRR006906.87379
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
acggtgtcgt
tRNA gene sequence
GTCCCCTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position
agcttccgac
Secondary structure (Cloverleaf model)
>SRA1004619	Glu	TTC
                   t      GCCA agcttccgac
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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