The detailed information of tRNA gene sequence


Sequence ID>SRA1004642
Genome IDSRR006906.93029
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 262
End posion on genome 187
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
acattagcaa
tRNA gene sequence 
GGTACCTTAGCTCAGATGGTAGAGCAATGGACTGAAAATCCATGTGTCCCTGGTTCGATC
CCTGGAGGTACCACAA
Downstream region at tRNA end position 
aacccactct
Secondary structure (Cloverleaf model)
>SRA1004642	Phe	GAA
                   a      ACAA aacccactct
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     T - A          C T
                    T     G G T C C     A
      A G A        A      | |   | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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