The detailed information of tRNA gene sequence


Sequence ID>SRA1004650
Genome IDSRR006906.94845
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 220
End posion on genome 135
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aacccgatgt
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGCCCCCCGGGTGTGA
GGGTTCGAGTCCCTCTCTTCGCACCA
Downstream region at tRNA end position 
tgcttctggc
Secondary structure (Cloverleaf model)
>SRA1004650	Leu	CAG
                   t      ACCA tgcttctggc
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCCCCCGGGTGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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