The detailed information of tRNA gene sequence


Sequence ID>SRA1004681
Genome IDSRR006906.101117
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 219
End posion on genome 143
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaataaattg
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAACGGTTCGAC
TCCGTTATTCTCCACGA
Downstream region at tRNA end position 
ttgttgaatt
Secondary structure (Cloverleaf model)
>SRA1004681	Ala	TGC
                   g      ACGA ttgttgaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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