The detailed information of tRNA gene sequence


Sequence ID>SRA1004683
Genome IDSRR006906.102003
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 132
End posion on genome 46
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
catcgactgt
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTG
AGGGTTCAAGTCCCTCTCTTCGCACCA
Downstream region at tRNA end position 
attgatgatc
Secondary structure (Cloverleaf model)
>SRA1004683	Leu	CAG
                   t      ACCA attgatgatc
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCCTTACGGACGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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