The detailed information of tRNA gene sequence


Sequence ID>SRA1004689
Genome IDSRR006906.103014
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 98
End posion on genome 174
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
acggcgctaa
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAA
TCCTGTCGGGCGTACCA
Downstream region at tRNA end position 
tttatttagg
Secondary structure (Cloverleaf model)
>SRA1004689	Arg	CCG
                   a      ACCA tttatttagg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A        | | | |     G
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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