The detailed information of tRNA gene sequence


Sequence ID>SRA1004692
Genome IDSRR006906.103218
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 147
End posion on genome 223
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcattttaat
tRNA gene sequence 
GCGTCTGTAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGATGGTTCGAG
TCCATTCAGACGCACCA
Downstream region at tRNA end position 
atccattatc
Secondary structure (Cloverleaf model)
>SRA1004692	Val	GAC
                   t      ACCA atccattatc
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     T T A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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