The detailed information of tRNA gene sequence


Sequence ID>SRA1004699
Genome IDSRR006906.106332
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaacctctac
tRNA gene sequence 
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAG
TCCACTCAGGCCTACCA
Downstream region at tRNA end position 
aattttccct
Secondary structure (Cloverleaf model)
>SRA1004699	Ile	GAT
                   c      ACCA aattttccct
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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