The detailed information of tRNA gene sequence


Sequence ID>SRA1004716
Genome IDSRR006906.112173
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 90
End posion on genome 166
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
cgccccgcat
tRNA gene sequence
CGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAA
TCCTCTCTCGCCGACCA
Downstream region at tRNA end position
ccattcgaaa
Secondary structure (Cloverleaf model)
>SRA1004716	Pro	TGG
                   t      ACCA ccattcgaaa
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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