The detailed information of tRNA gene sequence


Sequence ID>SRA1004726
Genome IDSRR006906.114851
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 41
End posion on genome 131
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
cttcaacaac
tRNA gene sequence
GGAGAGATGGCTGAGTGGTTGAAAGCACCGGTCTTGAAAACCGGCGTACGTTAATAGCGT
ACCTAGGGTTCAAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position
cattcgaaaa
Secondary structure (Cloverleaf model)
>SRA1004726	Ser	TGA
                   c      GCCA cattcgaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       T A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CGTACGTTAATAGCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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