The detailed information of tRNA gene sequence


Sequence ID>SRA1004745
Genome IDSRR006906.121284
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 176
End posion on genome 103
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
catccattga
tRNA gene sequence 
GGCGCGTTGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTGAACCTCGGTTCGACTCC
GGGACGCGCCTCCA
Downstream region at tRNA end position 
ttctttctaa
Secondary structure (Cloverleaf model)
>SRA1004745	Cys	GCA
                   a      TCCA ttctttctaa
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     GAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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