The detailed information of tRNA gene sequence


Sequence ID>SRA1004796
Genome IDSRR006906.139086
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 152
End posion on genome 228
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtgatcggtt
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
TCCAACCAGACCCACCA
Downstream region at tRNA end position 
acctaggccc
Secondary structure (Cloverleaf model)
>SRA1004796	Ile	GAT
                   t      ACCA acctaggccc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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