The detailed information of tRNA gene sequence


Sequence ID>SRA1004829
Genome IDSRR006906.154320
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 183
End posion on genome 107
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcagttcga
tRNA gene sequence 
GGCTGAGTAGCTCAGTTGGTTAGAGCGCACGACTCATAATCGTGAGGTCGCGGGATCGTG
CCCCGCCTCAGCTACCA
Downstream region at tRNA end position 
ataaatgtca
Secondary structure (Cloverleaf model)
>SRA1004829	Met	CAT
                   a      ACCA ataaatgtca
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          C G
                    T     C G C C C     T
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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