The detailed information of tRNA gene sequence


Sequence ID>SRA1004835
Genome IDSRR006906.156935
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 171
End posion on genome 95
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaacctctac
tRNA gene sequence 
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAG
TCCACTCAGGCCTACCA
Downstream region at tRNA end position 
aattttccct
Secondary structure (Cloverleaf model)
>SRA1004835	Ile	GAT
                   c      ACCA aattttccct
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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