The detailed information of tRNA gene sequence


Sequence ID>SRA1004839
Genome IDSRR006906.159717
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 86
End posion on genome 11
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agagattcgt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
tctttaagca
Secondary structure (Cloverleaf model)
>SRA1004839	Ala	GGC
                   t      ACCA tctttaagca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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