The detailed information of tRNA gene sequence


Sequence ID>SRA1004886
Genome IDSRR006906.171616
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 106
End posion on genome 30
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ntattgaagt
tRNA gene sequence 
GCAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCTGCGCCA
Downstream region at tRNA end position 
tttccttgat
Secondary structure (Cloverleaf model)
>SRA1004886	Asp	GTC
                   t      GCCA tttccttgat
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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