The detailed information of tRNA gene sequence


Sequence ID>SRA1004935
Genome IDSRR006906.188241
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 129
End posion on genome 45
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
tcgcacttgg
tRNA gene sequence
GGAGGGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCTGCCTTCGAA
GGTTCGAATCCTTCTCCCTCCACCA
Downstream region at tRNA end position
ttcaagtgcg
Secondary structure (Cloverleaf model)
>SRA1004935	Tyr	GTA
                   g      ACCA ttcaagtgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCTGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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