The detailed information of tRNA gene sequence


Sequence ID>SRA1004945
Genome IDSRR006906.192813
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 96
End posion on genome 171
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
caaataatgt
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACTGGTTCGAAC
CCGGTATCGCCCACCA
Downstream region at tRNA end position 
ctctctaaga
Secondary structure (Cloverleaf model)
>SRA1004945	Val	TAC
                   t      ACCA ctctctaaga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     T G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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