The detailed information of tRNA gene sequence


Sequence ID>SRA1004961
Genome IDSRR006906.199131
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 160
End posion on genome 236
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacaacaaac
tRNA gene sequence 
GGCTATGTAGCTCAGTTGGTTAGAGCATCGCACTCATAATGCGGGGGTCACAGGTTCGAA
TCCCGTCATAGCCACCA
Downstream region at tRNA end position 
tttttgaaaa
Secondary structure (Cloverleaf model)
>SRA1004961	Met	CAT
                   c      ACCA tttttgaaaa
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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