The detailed information of tRNA gene sequence


Sequence ID>SRA1004967
Genome IDSRR006906.201971
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 262
End posion on genome 176
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTG
AGGGTTCAAGTCCCTCTCTTCGCACCA
Downstream region at tRNA end position 
agctggcgac
Secondary structure (Cloverleaf model)
>SRA1004967	Leu	CAG
                   t      ACCA agctggcgac
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTTCTTACGGACGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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