The detailed information of tRNA gene sequence


Sequence ID>SRA1004976
Genome IDSRR006906.206481
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 39
End posion on genome 115
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accagacagc
tRNA gene sequence 
GGAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
cttattacga
Secondary structure (Cloverleaf model)
>SRA1004976	Asp	GTC
                   c      GCCA cttattacga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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