The detailed information of tRNA gene sequence


Sequence ID>SRA1005017
Genome IDSRR006906.224915
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 154
End posion on genome 229
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
catgattttc
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
cttctcttct
Secondary structure (Cloverleaf model)
>SRA1005017	Glu	TTC
                   c      GCCA cttctcttct
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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