The detailed information of tRNA gene sequence


Sequence ID>SRA1005020
Genome IDSRR006906.226368
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 9
End posion on genome 96
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nncgcccatt
tRNA gene sequence 
GGAAGGATGGCCGAGTGGTTTAAGGCAACGGTCTTGAAAACCGTCGAGTGTAACAGCTCC
CAGAGTTCGAATCTCTGTCCTTCCGCCA
Downstream region at tRNA end position 
aattcagccg
Secondary structure (Cloverleaf model)
>SRA1005020	Ser	TGA
                   t      GCCA aattcagccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAGTGTAACAGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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