The detailed information of tRNA gene sequence


Sequence ID>SRA1005021
Genome IDSRR006906.226505
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 123
End posion on genome 36
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgacaattt
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GGGGGTTCGAATCCCCCCCTCACCGCCA
Downstream region at tRNA end position 
tatttaagtt
Secondary structure (Cloverleaf model)
>SRA1005021	Ser	GGA
                   t      GCCA tatttaagtt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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