The detailed information of tRNA gene sequence


Sequence ID>SRA1005049
Genome IDSRR006906.241781
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 136
End posion on genome 63
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
accccacctT
tRNA gene sequence 
AGGGGCATAGTTTAGCGGGTAGAACTACGGTCTCCAAAACCGTCAGCGCGGGTTCGATTC
CTGCTGCCCCTGTtt
Downstream region at tRNA end position 
taatttcatc
Secondary structure (Cloverleaf model)
>SRA1005049	Trp	CCA
                   T      GTtt taatttcatc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C G T C C     A
      C G A        A      | | + | |     G
    G       T T T G       G C G G G     C
    G       + | | |                 T T
    G       G A A C
      T A          T     CAGC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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