The detailed information of tRNA gene sequence


Sequence ID>SRA1005100
Genome IDSRR006907.24525
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 114
End posion on genome 190
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgggtatcac
tRNA gene sequence 
CGGGATATAGCGCAGCTTGGTAGCGTTCCTGATTTGGGTTCAGGAGGTCGCAGGTTCGAA
TCCTGCTATCCCGATCA
Downstream region at tRNA end position 
atcagttaaa
Secondary structure (Cloverleaf model)
>SRA1005100	Pro	TGG
                   c      ATCA atcagttaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C G C G       G C A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        T     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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