The detailed information of tRNA gene sequence


Sequence ID>SRA1005120
Genome IDSRR006907.43956
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 165
End posion on genome 91
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtgggttatc
tRNA gene sequence 
GGGCGGCTAGCTCAGCGGGAGAGCACTCCCTTCACACGGGAGGGGTCACAGGTTCAATCC
CTGTGCCGCCCACCA
Downstream region at tRNA end position 
ttttttcgtt
Secondary structure (Cloverleaf model)
>SRA1005120	Val	CAC
                   c      ACCA ttttttcgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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