The detailed information of tRNA gene sequence


Sequence ID>SRA1005127
Genome IDSRR006907.51767
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 23
End posion on genome 100
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttaggtaatt
tRNA gene sequence 
CGGGGATTAGCGCAGCCTGGCTAGCGCGCTTGCTTGGGGTGCAAGAGGTCATGGGTTCAA
ATCCCGTATCCCCGACTA
Downstream region at tRNA end position 
tctacagaaa
Secondary structure (Cloverleaf model)
>SRA1005127	Pro	GGG
                   t      ACTA tctacagaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G C C C     A
    C C G A        A      | + | | |     A
  T         C G C G       A T G G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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