The detailed information of tRNA gene sequence


Sequence ID>W1810368241
Genome IDPVZM01000036
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia fungorum LMG 28183 [PVZM]
Start position on genome 30920
End posion on genome 31015
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
aatcaccgta
tRNA gene sequence 
GGAAGGCATTCGCATCCGGTGGTGCGGCTGGATTTCAAATCCAGTTGAGGGCGTCAGACG
CTCTCAGGTCGGTTCGACTCCGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
gccggggctt
Secondary structure (Cloverleaf model)
>W1810368241	Sec	TCA
                   a      GCCA gccggggctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G C C     A
      C C T        T      | + | | |     G
    G       A C G C       G T C G G     C
    G       | | | |                 T T
    T       T G C G
      G G          G     TTGAGGGCGTCAGACGCTCTCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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